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Antoine Bichat
Mathematical Engineer - PhD Student in biostatistics
Education
PhD
Enterome & LaMME
Paris area, France
2020 - 2018
Discovering multi-scale metagenomic signatures through hierarchical organization of species. Tutored by Dr Christophe Ambroise, Dr Mahendra Mariadassou and Mr Jonathan Plassais
Mathematics of Modelling Master’s degree
Sorbonne Université
Paris, France
2017 - 2016
- Applied Mathematics for Biology and Medical Sciences
- Data Science
Graduate Engineering School
Mines Nancy
Nancy, France
2017 - 2014
- Mathematical engineering
- Bioengineering
Classe Préparatoire aux Grandes Écoles
Lycée du Parc, MP*
Lyon, France
Professional Experience
Biostatistician intern
Nestlé Research Center
Lausanne, Switzerland
2017
- Data analysis of microbiome 16S sequencing
- Implementation of DADA2 pipeline for sample inference
Biostatistician intern
Enterome
Paris, France
2016
- Data analysis of microbiome Illumina next-generation sequencing
- Writing and automation of bioinformatics quality control report
Teaching Experience
Data Science Starter Program
École Polytechnique, 14h, continuing education
Paris area, France
2019
An Introduction to the Linear Model
AgroParisTech, 40h, engineering students
Paris, France
2019 - 2018
Visualization with R
Mines Nancy, 3h, engineering students
Nancy, France
2017
Scientific productions
Incorporating phylogenetic information in microbiome abundance studies has no effect on detection power and FDR control
Article submited in Frontiers in Microbiology
N/A
2019
Antoine Bichat, Jonathan Plassais, Christophe Ambroise and Mahendra Mariadassou
Quantifying the impact of tree choice in metagenomics differential abundance studies with R
Poster for UseR! 2019
Toulouse, France
2019
- Winner of Biostatistics poster prize
Volunteer Work
During Engineering School
Mines Nancy
Nancy, France
2017 - 2014
- Academic year-group representative
- Student member of the Executive Board of Mines Nancy
- President of the debating and conference club
- Communication Officer for the recruitment forum of Mines Nancy
UDPS 69 (first aid association)
First aid worker, lifeguard
Lyon area, France
2014 - 2011